Browse of TCMCG006C116163 protein

CDS

Accession Number	TCMCG006C116163
gbkey	CDS
Protein Id	XP_013648041.1
Location	join(55563..55721,56101..56198,56317..56444,56801..56912,57065..57245,57370..57552,57733..57915,58006..58087,58200..58315,58421..58716,58849..58945,59243..59383,59478..59561,59666..59752,59883..60029,60171..60296,60389..60487,60597..60664,60769..60835,60956..61126,61214..61303,61399..61479,61569..61642,61737..61808,61895..61984,62132..62198)
Gene	LOC106352932
GeneID	106352932
Organism	Brassica napus

Protein

Length	1032aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013792587.2
Definition	E3 ubiquitin-protein ligase UPL6-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTTTCTCCGGCGATCCGTCGACTCGGAAGCGAGTTGATTTAGGTGGCCGGAGCACTAAGGAGAGAGATGCTCGGAAGCTTCTGGAGCAGACCAGGATGGAGCGTAATCGCCGTCTGCTTCAGAAGCAGCAGAATGCCGCTGCCCTCAAAATTCAGAAATTCTTTAGAGGTAGAAGATCAGTGGCCACTGAGCGCTCCAAGGTGAGGCGTGAGTTCTGTGAAACCTATGGGGATAATTGCCAGAATGTCGATAGGCATTGCTTTGAGCCAGGTTCAAGCTTCCTCCGTCAGTTTCTGTTTTTCTTCAAGGCAAAAAACTCGGGGGATTTTCTGATACTTGTGGAGACGTGTCGCCTACTGAAAATGTTTGCTCACAGCAATGGTGACATTCTCAGCCTTTTCTCTGGCTCGGACTATTCCGCTGAGCATAATTTGGTGGATTTTAGAGTAAAGGAACTTGCTTTTACCTGCATTGAGGCTATACATCAGAATAGGGACCGTTTAAGGGATCAGCTGTTAGTTACCACTGAAGAAGCCAGCACCTCAACAGCTATATTGATGGAGGCGATGTCATTGGTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAACTGTGAGTTATCTACAGAAAAGACACATATTCAAACTGGTCAGAGAAATCGTCATTACAGCTAAGGAAAACCCTAGAGGTCAGACTAAGACCGGCAACATTCTTTCACTTGAAAGAGTATTGATCCTGGTAGTATCTCATGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGATGATCCACGTTGGAGTTTCTCATCTATGATCCTTACATTGCCCTTGATATGGCAGCTCTTCCCAAACCTGAAAGTGGTCTTTGCCAACCCAAATCTAAGTCAACATTACATTCACCAGATGGCTTTCTGTATTCAAAAGGATACCCATGTTCTCCCAATAGATACAAGCACAGAGTTCCCTGGTTATGCTTGTCTTCTTGGTAATACGTTGGAAACTGCAAATGTGGTGTTGTCACAGCCTGACTGTTCATTGGATATGGCAGTTGACATTGCATCAGTTGCAACTTTCTTGTTAGAGAAACTTCCTCCTGTGAAGTCATCAGAAAGAGAAAGCAAACAGAGCTCTTCTGAGGAGGATGATATGTTGATTGACGATATACCAGAATTAGTCCTGAATAAGACTCTGGAGCAGCAGATAACCTCCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATGTTTTGTTCCATCAAGTTTCGCTTGGTACACAGCCATATGATGAAGATAAAGAAGCACAAGCTATTGGCACAGCCAGTTCTTTTCTGTATGCAGCATTCAACACTCTCCCTCTTGAGAGAATCATGACAGTTTTGGCTTATAGAACGGAGCTTGTAGTTGTGCTGTGGAATTATATGAAACGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAATCTCCTAGCTTACCTTCCAGGAGATGCTCCGGGTTGGCTATTACCTCTGGTTGTTTTTTGTCCTGTTTATAAGCATATGCTTATGATAGTCGACAATGAGGAGTTTTACGAACGGGAGAAGCCACTGTCGCTACAAGATATCAGGTTGCTTATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTATGGGTGAATCCACTTACGCAGCCTAGCACGGGGAAATCTGTCTCCAACAACCTCTCAAAGAAGAACCCTGTTGGCTTGATTCAGAACAGGGCTGGGGTTGTAGTTGCTGAATTACTTTCACAGTTACAAGATTGGAACAACCGGCAACAATTCACTTCCTCGAGCGATTTCCAAGCTGATACAGTCAACGAATATTTTATCTCTCAGGCAATAGCGGAAGGTACAAGAGCCAACTACATACTGATGCACGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAGATTTTCACAACACAATTAGCAACGGCGAGGGAGAGTCATGGTCATGGATCTCAAGCCATTTTTGCTCGAAATCGGTTCAGAATACGAAGAGATCACATCTTGGAAGATGCTTACAATCAAATGAGTGCATTGTCAGAAGATGATCTCCGGGGATCGATTCGCGTGACATTTGTCAATGAACTTGGAGTTGAGGAAGCTGGTATTGATGGTGGTGGCATTTTTAAAGACTTCATGGAGAAAATTACCCGAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAGACCGTTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGGTACATGACCAGCATCTCCAGTTCTTTCATTTTCTCGGCACTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATATACCATTTGCAACTTTTTTCCTCAGCAAATTGAAACACAAGTACAACTATTTGAACGATTTGCCTTCTCTGGATCCTGAGTTGTATAAGCATCTTATATTTCTGAAGCGTTATAAGGGTAATATCGCAGAGTTGGAGCTTTACTTTGTTATTCTCAACAACGAATATGGAGAGAGGACAGAGGAAGAGTTACTTCAAGGGGGTAAAGACATGCGGGTTACAAATGAGAATGTTATAACTTTCATTCATCTGGTTTCAAATCATCGGTTGAATTTTCAGATACGCCAACAGAGTTCTCATTTCTTGAGAGGGTTTCAGCAACTCATTCCAAAAGAATGTATCGACATGTTCAATGAACATGAGCTTCAGGTTCTTATATCTGGTTCAGCTGATTATTTGGATATTGACGACTTGCGTCAGAACACTAACTATACAGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTTCTGAAAAGCTTCTCAACCGAAAACCAGAAGAAGTTCTTAAAATTTGTGACAGGCTGTTCGAGAGGACCACTGCTTGGTTTCAAATACTTGGAACCTGCATTCTGTATACAGAGGGCTGCGGGTAGCGCGAGTAATGAAGCAGTTGATAGACTACCTACATCAGCCACTTGTATGAACCTTCTCAAGCTTCCTCCCTATCAAAGCAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGTTTTGACCTGAGCTGA

Protein:   MFFSGDPSTRKRVDLGGRSTKERDARKLLEQTRMERNRRLLQKQQNAAALKIQKFFRGRRSVATERSKVRREFCETYGDNCQNVDRHCFEPGSSFLRQFLFFFKAKNSGDFLILVETCRLLKMFAHSNGDILSLFSGSDYSAEHNLVDFRVKELAFTCIEAIHQNRDRLRDQLLVTTEEASTSTAILMEAMSLVLDPKLPWVCKTVSYLQKRHIFKLVREIVITAKENPRGQTKTGNILSLERVLILVVSHVGREPCCCPVDDPRWSFSSMILTLPLIWQLFPNLKVVFANPNLSQHYIHQMAFCIQKDTHVLPIDTSTEFPGYACLLGNTLETANVVLSQPDCSLDMAVDIASVATFLLEKLPPVKSSERESKQSSSEEDDMLIDDIPELVLNKTLEQQITSNAIDSRFLLQLTNVLFHQVSLGTQPYDEDKEAQAIGTASSFLYAAFNTLPLERIMTVLAYRTELVVVLWNYMKRCHENQKWSSMPNLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPSTGKSVSNNLSKKNPVGLIQNRAGVVVAELLSQLQDWNNRQQFTSSSDFQADTVNEYFISQAIAEGTRANYILMHAPFLIPFTSRVKIFTTQLATARESHGHGSQAIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETVDHMLYPNPGSGMVHDQHLQFFHFLGTLLAKAMFEGILVDIPFATFFLSKLKHKYNYLNDLPSLDPELYKHLIFLKRYKGNIAELELYFVILNNEYGERTEEELLQGGKDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKECIDMFNEHELQVLISGSADYLDIDDLRQNTNYTGGYNAGHYVIDMFWEVLKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS